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#4078 closed defect (fixed)

test_gdal_configured fails with GDAL 2.3.0-rc1

Reported by:	sebastic	Owned by:	pramsey
Priority:	high	Milestone:	PostGIS 2.4.5
Component:	postgis	Version:	2.4.x
Keywords:		Cc:

Description

The gdal test suite fails with GDAL 2.3.0-rc1:

Suite: gdal
  Test: test_gdal_configured ...ERROR 4: Unable to open EPSG support file gcs.csv.  Try setting the GDAL_DATA environment variable to point to the directory containing EPSG csv files.
FAILED
    1. cu_gdal.c:28  - rt_util_gdal_configured()
  Test: test_gdal_drivers ...passed
  Test: test_gdal_rasterize ...passed
  Test: test_gdal_polygonize ...passed
  Test: test_raster_to_gdal ...Warning 1: Cannot find pcs.csv
Warning 1: Cannot find datum.csv or gdal_datum.csv
Warning 1: Cannot find ellipsoid.csv
Warning 1: Cannot find prime_meridian.csv
Warning 6: PNG driver doesn't support data type Float64. Only eight bit (Byte) and sixteen bit (UInt16) bands supported. Defaulting to Byte

passed
  Test: test_gdal_to_raster ...passed
  Test: test_gdal_warp ...passed

The full buildlog is attached.

Attachments (1)

postgis_2.4.4+dfsg-2_amd64.build (445.4 KB ) - added by sebastic 7 years ago.

Download all attachments as: .zip

Change History (10)

by sebastic, 7 years ago

Attachment:	postgis_2.4.4+dfsg-2_amd64.build added

comment:1 by Algunenano, 7 years ago

It's working for me using latest postgis with latest gdal. Either your gdal package is missing the support files or postgis is not finding them.

Can you check if the package includes the EPSG files, like gcs.csv? In my installation they are installed in /usr/share/gdal. If so, can you try setting the GDAL_DATA variable before running the tests with something like GDAL_DATA=$(gdal-config --datadir) make check

comment:2 by sebastic, 7 years ago

The gdal Debian package has used /usr/share/gdal/<GDAL_VERSION_MARJOR>.<GDAL_VERSION_MINOR> for GDAL_DATA for a very long time.

# ls -l $(gdal-config --datadir)/gcs.csv
-rw-r--r-- 1 root root 54388 May  4 16:33 /usr/share/gdal/2.3/gcs.csv

CPLFinderInit() is patched to use this path instead of /usr/share/gdal.

I suspect this code path is not used in 2.3 any more.

comment:3 by sebastic, 7 years ago

Related issue in GDAL: https://github.com/OSGeo/gdal/issues/582

comment:4 by rouault, 7 years ago

Bas, I've just built Postgis trunk r16556 on a Debian testing with gdal 2.3.0-rc1 from experimental, and 'make check' in raster/test/cunit works fine. However I can reproduce the issue you have by setting GDAL_DATA to the empty string (contrary to not setting it at all), which must be interpreted by GDAL as equivalent to the current directory, so I suspect that must be your issue

Last edited 7 years ago by rouault (previous) (diff)

comment:5 by sebastic, 7 years ago

Thanks for testing, Even. That seems to imply that something sets GDAL_DATA, which the Debian package does not.

I'm currently building a new gdal package which doesn't use the version specific data & gdalplugins directory any more. That doesn't have a lot of value now that only a single gdal-data package can be installed (which provides /usr/share/gdal).

Once that's ready I'll test this issue again.

comment:6 by rouault, 7 years ago

Alternatively could you check the output of strace -f make check 2>&1 | grep csv from raster/test/cunit to see in which directories it attempts to find the csv files ?

comment:7 by sebastic, 7 years ago

Running make check via strace in raster/test/cunit works on my site too, but the running the tests as part of the Debian package build (via pg_virtualenv) still fails.

Running that make check invocation via strace shows that gcs.csv is loaded correctly, but other tests fail.

This is starting to look like a heisenbug.

comment:8 by sebastic, 7 years ago

test_gdal_configured succeeds with the new gdal package, but two other tests now fail:

 rt_gdalwarp .. failed (diff expected obtained: /tmp/pgis_reg/test_50_diff)
 rt_asraster .. failed (diff expected obtained: /tmp/pgis_reg/test_51_diff)
...
--- rt_gdalwarp_expected        2018-04-06 05:05:52.000000000 +0000
+++ /tmp/pgis_reg/test_50_out   2018-05-07 20:41:43.339711352 +0000
@@ -1,40 +1,9 @@
 NOTICE:  table "raster_gdalwarp_src" does not exist, skipping
 NOTICE:  table "raster_gdalwarp_dst" does not exist, skipping
+ERROR:  rt_raster_gdal_warp: Could not create GDAL transformation object for output dataset creation
 NOTICE:  Values must be provided for both X and Y when specifying the scale.  Returning original raster
 NOTICE:  Values must be provided for both X and Y when specifying the scale.  Returning original raster
-NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
-NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
-NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
-NOTICE:  Values must be provided for both X and Y when specifying the scale.  Returning original raster
-NOTICE:  Values must be provided for both X and Y when specifying the scale.  Returning original raster
-0.0|||||||||||||
-0.1|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
-0.10|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
-0.11|992163|11|10|1|1000.000|-1000.000|0.000|0.000|-500001.000|600000.000|t|t|t
-0.12|992163|10|11|1|1000.000|-1000.000|0.000|0.000|-500000.000|600009.000|t|t|t
-0.13|992163|11|11|1|1000.000|-1000.000|0.000|0.000|-500100.000|600950.000|t|t|t
-0.14|992163|201|201|1|50.000|50.000|0.000|0.000|-500040.000|589957.000|t|t|t
-0.15|992163|84|84|1|121.000|121.000|0.000|0.000|-500093.000|589875.000|t|t|t
-0.16|993310|243|243|1|50.000|50.000|0.000|0.000|950710.000|1397157.000|t|t|t
-0.17|993309|243|243|1|50.000|50.000|0.000|0.000|950760.000|1396957.000|t|t|t
-0.18|992163|10|10|1|1000.000|-1000.000|3.000|3.000|-500030.000|600000.000|t|t|t
-0.19|993310|12|12|1|1009.894|-1009.894|3.000|3.000|950691.792|1409281.783|t|t|t
-0.2|993309|12|12|1|1009.916|-1009.916|0.000|0.000|950762.305|1409088.896|t|t|t
-0.20|993309|12|12|1|1009.916|-1009.916|1.000|3.000|950742.107|1409088.896|t|t|t
-0.21|993310|24|24|1|500.000|500.000|3.000|3.000|950657.188|1397356.783|t|t|t
-0.22|993310|26|26|1|500.000|500.000|0.000|6.000|950452.000|1396632.000|t|t|t
-0.23|984269|12|8|1|0.012|-0.012|0.000|0.000|-107.029|50.206|t|t|t
-0.24|974269|12|8|1|0.012|-0.012|0.000|0.000|-107.029|50.206|t|t|t
-0.25|0|5|5|1|2.000|-2.000|0.000|0.000|0.000|0.000|t|t|t
-0.26|0|2|2|1|5.000|-5.000|0.000|0.000|0.000|0.000|t|t|t
-0.27|0|100|100|1|0.100|-0.100|0.000|0.000|0.000|0.000|t|t|t
-0.3|994269|12|8|1|0.012|-0.012|0.000|0.000|-107.029|50.206|t|t|t
-0.4|993310|24|24|1|500.000|500.000|0.000|0.000|950732.188|1397281.783|t|t|t
-0.5|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
-0.6|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
-0.7|992163|20|20|1|500.000|500.000|0.000|0.000|-500000.000|590000.000|t|t|t
-0.8|992163|40|40|1|250.000|250.000|0.000|0.000|-500000.000|590000.000|t|t|t
-0.9|992163|40|40|1|250.000|250.000|0.000|0.000|-500000.000|590000.000|t|t|t
+ERROR:  rt_raster_gdal_warp: Could not create GDAL transformation object for output dataset creation
 1.0|||||||||||||
 1.1|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
 1.10|992163|10|11|1|1000.000|-1000.000|0.000|0.000|-500000.000|600009.000|t|t|t
@@ -61,21 +30,6 @@
 1.7|992163|40|40|1|250.000|250.000|0.000|0.000|-500000.000|590000.000|t|t|t
 1.8|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
 1.9|992163|11|10|1|1000.000|-1000.000|0.000|0.000|-500001.000|600000.000|t|t|t
-2.1|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
-2.10|993310|24|24|1|500.000|500.000|0.000|0.000|950732.188|1397281.783|t|t|t
-2.11|993309|121|121|1|100.000|100.000|0.000|0.000|950762.305|1396988.896|t|t|t
-2.12|993310|6|6|1|2000.000|2000.000|0.000|0.000|950732.188|1397281.783|t|t|t
-2.13|993310|8|8|1|1500.000|1500.000|0.000|0.000|950732.188|1397281.783|t|t|t
-2.14|993310|24|24|1|500.000|500.000|0.000|0.000|950732.188|1397281.783|t|t|t
-2.15|993310|16|16|1|750.000|750.000|0.000|0.000|950732.188|1397281.783|t|t|t
-2.2|993309|12|12|1|1009.916|-1009.916|0.000|0.000|950762.305|1409088.896|t|t|t
-2.3|994269|12|8|1|0.012|-0.012|0.000|0.000|-107.029|50.206|t|t|t
-2.4|||||||||||||
-2.5|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
-2.6|||||||||||||
-2.7|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
-2.8|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
-2.9|993310|12|12|1|1009.894|-1009.894|0.000|0.000|950732.188|1409281.783|t|t|t
 3.1|992163|100|100|1|100.000|100.000|0.000|0.000|-500000.000|590000.000|t|t|t
 3.2|992163|100|100|1|100.000|100.000|0.000|0.000|-500000.000|590000.000|t|t|t
 3.3|992163|10|10|1|1000.000|-1000.000|0.000|0.000|-500000.000|600000.000|t|t|t
@@ -115,8 +69,7 @@
 5.7|992163|10|11|1|1000.000|-1000.000|0.000|0.000|-500000.000|600991.000|t|t|t
 5.8|992163|10|11|1|1000.000|-1000.000|0.000|0.000|-500000.000|600001.000|t|t|t
 5.9|992163|10|11|1|1000.000|-1000.000|0.000|0.000|-500000.000|600009.000|t|t|t
-NOTICE:  The rasters (pixel corner coordinates) are not aligned
-t|f|t
+ERROR:  rt_raster_gdal_warp: Could not create GDAL transformation object for output dataset creation
 NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
 NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
 NOTICE:  Raster has default geotransform. Adjusting metadata for use of GDAL Warp API
 ### /tmp/pgis_reg/test_51_diff ###
--- rt_asraster_expected        2018-04-06 05:05:52.000000000 +0000
+++ /tmp/pgis_reg/test_51_out   2018-05-07 20:41:44.119707831 +0000
@@ -10,55 +10,4 @@
 NOTICE:  The geometry's SRID (993310) is not the same as the raster's SRID (992163).  The geometry will be transformed to the raster's projection
 NOTICE:  The geometry's SRID (993310) is not the same as the raster's SRID (992163).  The geometry will be transformed to the raster's projection
 NOTICE:  The geometry's SRID (993310) is not the same as the raster's SRID (992163).  The geometry will be transformed to the raster's projection
-NOTICE:  The rasters have different scales on the X axis
-NOTICE:  The rasters have different scales on the X axis
-NOTICE:  The rasters have different scales on the X axis
-NOTICE:  The rasters have different scales on the X axis
-1.0||||||||||||||||
-1.1|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|1.000|1.000|
-1.10|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|32BF|0.000|t|1.000|1.000|
-1.11|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|8BSI|0.000|t|1.000|1.000|
-1.12|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|16BUI|0.000|t|1.000|1.000|
-1.13|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|32BF|0.000|t|255.000|255.000|
-1.14|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|32BF|1.000|t|255.000|255.000|
-1.15|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|1.000|1.000|
-1.16|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|32BF||t|0.000|255.000|
-1.17|993310|141|87|2|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|32BF||t|0.000|255.000|
-1.18|993310|10|10|2|14065.366|-8691.142|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|255.000|255.000|
-1.19|993310|141|87|3|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|32BF||t|0.000|255.000|
-1.2|993310|1407|869|1|100.000|-100.000|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|1.000|1.000|
-1.20|993310|141|87|2|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|1BB|1.000|f|||
-1.3|993310|500|500|1|281.307|-173.823|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|1.000|1.000|
-1.4|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|1.000|1.000|
-1.5|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|8BSI|0.000|t|1.000|1.000|
-1.6|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|16BUI|0.000|t|1.000|1.000|
-1.7|993310|1407|869|1|100.000|-100.000|0.000|0.000|-175453.086|114987.661|32BF|0.000|t|1.000|1.000|
-1.8|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|8BSI|0.000|t|1.000|1.000|
-1.9|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175453.086|114987.661|16BUI|0.000|t|1.000|1.000|
-2.0||||||||||||||||
-2.1||||||||||||||||
-2.2|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-175400.000|115000.000|8BUI|0.000|t|255.000|255.000|
-2.3|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-170000.000|114988.000|8BUI|0.000|t|255.000|255.000|
-2.4|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-170000.000|110000.000|8BUI|0.000|t|255.000|255.000|
-2.5|993310|141|87|1|1000.000|-1000.000|0.000|0.000|-179000.000|119000.000|8BUI|0.000|t|255.000|255.000|
-2.6|993310|100|100|1|1406.537|-869.114|0.000|0.000|-179000.000|119000.000|8BUI|0.000|t|255.000|255.000|
-2.7|993310|100|100|1|1406.537|-869.114|0.000|0.000|-179000.000|119000.000|8BUI|0.000|t|255.000|255.000|
-3.0||||||||||||||||
-3.1|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|255.000|255.000|
-3.2|993310|100|100|1|1406.537|-869.114|0.000|0.000|-175453.086|114987.661|8BUI|0.000|t|255.000|255.000|
-3.3|993310|100|100|1|1406.537|-869.114|1.000|0.000|-175565.609|114987.661|8BUI|0.000|t|255.000|255.000|
-3.4|993310|100|100|1|1406.537|-869.114|0.000|1.000|-175453.086|114987.661|8BUI|0.000|t|255.000|255.000|
-3.5|993310|101|101|1|1406.537|-869.114|10.000|-5.000|-176465.793|115491.747|8BUI|0.000|t|255.000|255.000|
-3.6|993310|100|101|1|1406.537|-869.114|-5.000|10.000|-175453.086|114987.661|8BUI|0.000|t|255.000|255.000|
-4.0||||||||||||||||
-4.1|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|8BUI|0.000|t|1.000|1.000|t
-4.10|993310|142|88|1|1000.000|-1000.000|0.000|0.000|-176100.000|115100.000|16BUI|0.000|t|13.000|13.000|f
-4.11|993310|142|88|1|1000.000|-1000.000|0.000|0.000|-176100.000|115100.000|16BUI|0.000|t|13.000|13.000|f
-4.2|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|64BF|0.000|t|1.000|1.000|t
-4.3|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|16BUI|0.000|t|13.000|13.000|t
-4.4|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|16BUI||t|0.000|13.000|t
-4.5|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|16BUI|0.000|t|13.000|13.000|t
-4.6|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|16BUI||t|0.000|13.000|t
-4.7|992163|150|117|1|1000.000|-1000.000|0.000|0.000|-1898000.000|-412000.000|16BUI|0.000|t|13.000|13.000|t
-4.8|993310|142|88|1|1000.000|-1000.000|0.000|0.000|-176000.000|115000.000|16BUI|0.000|t|13.000|13.000|f
-4.9|993310|142|88|1|1000.000|-1000.000|0.000|0.000|-176453.000|115987.000|16BUI|0.000|t|13.000|13.000|f
+ERROR:  rt_raster_gdal_warp: Could not create GDAL transformation object for output dataset creation

I think we can close this issue because test_gdal_configured succeeds now, and leave the two failures for another time/ticket.

comment:9 by pramsey, 7 years ago

Resolution:	→ fixed
Status:	new → closed

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