Make check fails v 2.1.3

[serbinsh]

Currently, I um unable to run a complete make check on my system:

...mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_node.o cu_node.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_libgeom.o cu_libgeom.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_split.o cu_split.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_stringbuffer.o cu_stringbuffer.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_triangulate.o cu_triangulate.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_homogenize.o cu_homogenize.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_force_sfs.o cu_force_sfs.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_wkt.o cu_out_wkt.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_wkb.o cu_out_wkb.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_gml.o cu_out_gml.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_kml.o cu_out_kml.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_geojson.o cu_out_geojson.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_svg.o cu_out_svg.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_surface.o cu_surface.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_out_x3d.o cu_out_x3d.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_in_geojson.o cu_in_geojson.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_in_wkb.o cu_in_wkb.c
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_in_wkt.o cu_in_wkt.c
cu_in_wkt.c: In function ‘cu_wkt_in’:
cu_in_wkt.c:54:6: warning: variable ‘rv’ set but not used [-Wunused-but-set-variable]
  int rv = 0;
      ^
cu_in_wkt.c: In function ‘test_wkt_in_errlocation’:
cu_in_wkt.c:332:6: warning: variable ‘rv’ set but not used [-Wunused-but-set-variable]
  int rv = 0;
      ^
mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -I.. -c -o cu_tester.o cu_tester.c
/bin/sh ../../libtool --mode=link mpicc -g -O2  -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include  -o cu_tester cu_algorithm.o cu_buildarea.o cu_clean.o cu_print.o cu_misc.o cu_ptarray.o cu_geodetic.o cu_geos.o cu_tree.o cu_measures.o cu_node.o cu_libgeom.o cu_split.o cu_stringbuffer.o cu_triangulate.o cu_homogenize.o cu_force_sfs.o cu_out_wkt.o cu_out_wkb.o cu_out_gml.o cu_out_kml.o cu_out_geojson.o cu_out_svg.o cu_surface.o cu_out_x3d.o cu_in_geojson.o cu_in_wkb.o cu_in_wkt.o cu_tester.o  ../liblwgeom.la -lcunit
libtool: link: mpicc -g -O2 -Wall -Wmissing-prototypes -I/data/software/geos/3.4.2/include -I/data/software/proj/4.8.0/include -o .libs/cu_tester cu_algorithm.o cu_buildarea.o cu_clean.o cu_print.o cu_misc.o cu_ptarray.o cu_geodetic.o cu_geos.o cu_tree.o cu_measures.o cu_node.o cu_libgeom.o cu_split.o cu_stringbuffer.o cu_triangulate.o cu_homogenize.o cu_force_sfs.o cu_out_wkt.o cu_out_wkb.o cu_out_gml.o cu_out_kml.o cu_out_geojson.o cu_out_svg.o cu_surface.o cu_out_x3d.o cu_in_geojson.o cu_in_wkb.o cu_in_wkt.o cu_tester.o  ../.libs/liblwgeom.so -lcunit -pthread -Wl,-rpath -Wl,/usr/local/lib
#mpicc -o cu_tester cu_algorithm.o cu_buildarea.o cu_clean.o cu_print.o cu_misc.o cu_ptarray.o cu_geodetic.o cu_geos.o cu_tree.o cu_measures.o cu_node.o cu_libgeom.o cu_split.o cu_stringbuffer.o cu_triangulate.o cu_homogenize.o cu_force_sfs.o cu_out_wkt.o cu_out_wkb.o cu_out_gml.o cu_out_kml.o cu_out_geojson.o cu_out_svg.o cu_surface.o cu_out_x3d.o cu_in_geojson.o cu_in_wkb.o cu_in_wkt.o cu_tester.o  ../.libs/liblwgeom.a -lm -lcunit -L/data/software/geos/3.4.2/lib -lgeos_c
/data/software/src/postgis/postgis-2.1.3/liblwgeom/cunit/.libs/lt-cu_tester: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by /data/software/geos/3.4.2/lib/libgeos-3.4.2.so)
make[2]: *** [check] Error 1
make[2]: Leaving directory `/data/software/src/postgis/postgis-2.1.3/liblwgeom/cunit'
make[1]: *** [check] Error 2
make[1]: Leaving directory `/data/software/src/postgis/postgis-2.1.3/liblwgeom'
make: *** [check] Error 1

SciLinux 6.5

This happens using both 2.1.3 and 2.2.0

[pramsey]

The problem is not in PostGIS, it's in your build setup somewhere

 /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by /data/software/geos/3.4.2/lib/libgeos-3.4.2.so)
make[2]: *** [check] Error 1

or in your decision to deploy dependencies outside the system areas. Patch accepted if it's something you can tweak in the build system to support your case that doesn't break other systems.

[kain]

Replying to pramsey:

The problem is not in PostGIS, it's in your build setup somewhere

 /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by /data/software/geos/3.4.2/lib/libgeos-3.4.2.so)
make[2]: *** [check] Error 1

or in your decision to deploy dependencies outside the system areas. Patch accepted if it's something you can tweak in the build system to support your case that doesn't break other systems.

I met a similar issue in v2.1.5 also (I've submitted a ticket http://trac.osgeo.org/postgis/ticket/3089 but assigned as 'invalid')

Two simple ways to workaround:

1. ln -s GCC/lib64/libstc++.so.6.0.XX /usr/lib64/libstdc++.so.6

2. replace the path /lib/lib64 with GCC/lib64 (for me in the "relink_command" of file raster2pgsql)

then everything will be OK.

Wish this helps to you.