Opened 20 months ago
Closed 5 weeks ago
#2428 closed enhancement (fixed)
xarray io for netCDF
Reported by: | darkblueb | Owned by: | |
---|---|---|---|
Priority: | major | Milestone: | OSGeoLive17.0 |
Component: | OSGeoLive | Keywords: | python, datacube |
Cc: |
Description
some sample code shows xarray.open_dataset()
yet it is not installed
xarray optional dependencies are described here:
https://docs.xarray.dev/en/stable/getting-started-guide/installing.html
Change History (11)
comment:1 by , 20 months ago
comment:2 by , 20 months ago
python3 pip install of [io] option:
$ python3 -m pip install --upgrade-strategy=only-if-needed --user "xarray[io]" Requirement already satisfied: xarray[io] in /usr/lib/python3/dist-packages (0.16.1) Collecting cfgrib Using cached cfgrib-0.9.10.3.tar.gz (6.4 MB) Installing build dependencies ... done Getting requirements to build wheel ... done Preparing metadata (pyproject.toml) ... done Requirement already satisfied: cftime in /usr/lib/python3/dist-packages (from xarray[io]) (1.5.2) Requirement already satisfied: fsspec in /usr/lib/python3/dist-packages (from xarray[io]) (2022.1.0) Collecting h5netcdf Using cached h5netcdf-1.1.0-py2.py3-none-any.whl (26 kB) Requirement already satisfied: netCDF4 in /usr/lib/python3/dist-packages (from xarray[io]) (1.5.8) Collecting pooch Using cached pooch-1.7.0-py3-none-any.whl (60 kB) Collecting pydap Using cached pydap-3.4.0-py3-none-any.whl (2.3 MB) Requirement already satisfied: rasterio in /usr/lib/python3/dist-packages (from xarray[io]) (1.3.4) Requirement already satisfied: scipy in /usr/lib/python3/dist-packages (from xarray[io]) (1.8.0) Collecting zarr Using cached zarr-2.14.2-py3-none-any.whl (203 kB) Requirement already satisfied: click in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (8.0.3) Collecting eccodes>=0.9.8 Using cached eccodes-1.5.2.tar.gz (2.3 MB) Preparing metadata (setup.py) ... done Requirement already satisfied: attrs>=19.2 in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (21.2.0) Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (1.21.5) Collecting h5py Downloading h5py-3.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.6/4.6 MB 255.5 kB/s eta 0:00:00 Requirement already satisfied: packaging in /usr/lib/python3/dist-packages (from h5netcdf->xarray[io]) (21.3) Requirement already satisfied: requests>=2.19.0 in /usr/lib/python3/dist-packages (from pooch->xarray[io]) (2.25.1) Collecting platformdirs>=2.5.0 Downloading platformdirs-3.5.0-py3-none-any.whl (15 kB) Collecting docopt Downloading docopt-0.6.2.tar.gz (25 kB) Preparing metadata (setup.py) ... done Requirement already satisfied: beautifulsoup4 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (4.10.0) Collecting Webob Downloading WebOb-1.8.7-py2.py3-none-any.whl (114 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 115.0/115.0 KB 245.6 kB/s eta 0:00:00 Requirement already satisfied: Jinja2 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (3.0.3) Requirement already satisfied: six>=1.4.0 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (1.16.0) Requirement already satisfied: click-plugins in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (1.1.1) Requirement already satisfied: setuptools in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (59.6.0) Requirement already satisfied: snuggs>=1.4.1 in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (1.4.7) Requirement already satisfied: affine in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (2.3.0) Requirement already satisfied: certifi in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (2020.6.20) Requirement already satisfied: cligj>=0.5 in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (0.7.2) Collecting asciitree Downloading asciitree-0.3.3.tar.gz (4.0 kB) Preparing metadata (setup.py) ... done Collecting numcodecs>=0.10.0 Downloading numcodecs-0.11.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (6.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.7/6.7 MB 253.8 kB/s eta 0:00:00 Collecting fasteners Downloading fasteners-0.18-py3-none-any.whl (18 kB) Collecting cffi Downloading cffi-1.15.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (441 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 441.8/441.8 KB 256.7 kB/s eta 0:00:00 Collecting findlibs Downloading findlibs-0.0.5.tar.gz (6.6 kB) Preparing metadata (setup.py) ... done Requirement already satisfied: entrypoints in /usr/lib/python3/dist-packages (from numcodecs>=0.10.0->zarr->xarray[io]) (0.4) Collecting pycparser Downloading pycparser-2.21-py2.py3-none-any.whl (118 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 118.7/118.7 KB 232.3 kB/s eta 0:00:00 Building wheels for collected packages: cfgrib, eccodes, asciitree, docopt, findlibs Building wheel for cfgrib (pyproject.toml) ... done Created wheel for cfgrib: filename=cfgrib-0.9.10.3-py3-none-any.whl size=46720 sha256=9c0f409d17cb75e892d404f7a201920631326e53e5fe5336dca291b11333b361 Stored in directory: /home/dbb/.cache/pip/wheels/64/d8/f6/7caecd8a01d42f7db5a764d8c06dbb2dced1a2aa9d9c1920d5 Building wheel for eccodes (setup.py) ... done Created wheel for eccodes: filename=eccodes-1.5.2-py3-none-any.whl size=40560 sha256=85cca204181cab6bb7eb722fd69072998183ddf0c29787c34f1275eff4f5814c Stored in directory: /home/dbb/.cache/pip/wheels/30/a8/9b/b80ae7683c2187d95eab008b4c57a5a57c50836aef413262a5 Building wheel for asciitree (setup.py) ... done Created wheel for asciitree: filename=asciitree-0.3.3-py3-none-any.whl size=5050 sha256=098ebc03f4d682dbbf19c37bf7087ad0cf5788b5daa7d2cbc8cf8a18947f520e Stored in directory: /home/dbb/.cache/pip/wheels/7f/4e/be/1171b40f43b918087657ec57cf3b81fa1a2e027d8755baa184 Building wheel for docopt (setup.py) ... done Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13723 sha256=0ea18e36ff95bf6459c270c6dd830bbd90fe81c2195da630611a12f53f49bac2 Stored in directory: /home/dbb/.cache/pip/wheels/fc/ab/d4/5da2067ac95b36618c629a5f93f809425700506f72c9732fac Building wheel for findlibs (setup.py) ... done Created wheel for findlibs: filename=findlibs-0.0.5-py3-none-any.whl size=6954 sha256=76365fd7f480032d11d70dc1429e503555c2577aa08b3e5394cebf2ac9bd8c8e Stored in directory: /home/dbb/.cache/pip/wheels/2e/67/14/22fa5b9fd9c41be520b37e908597d6a262803c0fcf2ba7c2c3 Successfully built cfgrib eccodes asciitree docopt findlibs Installing collected packages: findlibs, docopt, asciitree, Webob, pycparser, platformdirs, numcodecs, h5py, fasteners, zarr, pydap, pooch, h5netcdf, cffi, eccodes, cfgrib WARNING: The scripts dods and pydap are installed in '/home/dbb/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. WARNING: The script cfgrib is installed in '/home/dbb/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. Successfully installed Webob-1.8.7 asciitree-0.3.3 cffi-1.15.1 cfgrib-0.9.10.3 docopt-0.6.2 eccodes-1.5.2 fasteners-0.18 findlibs-0.0.5 h5netcdf-1.1.0 h5py-3.8.0 numcodecs-0.11.0 platformdirs-3.5.0 pooch-1.7.0 pycparser-2.21 pydap-3.4.0 zarr-2.14.2
comment:3 by , 19 months ago
python3 import missing a dependency of cfgrib
import logging import rasterio import rasterio.features import shapely.affinity import shapely.geometry import shapely.ops from datacube.index.hl import Doc2Dataset from datacube.utils import changes from rasterio import RasterioIOError /usr/lib/python3/dist-packages/xarray/backends/cfgrib_.py:27: UserWarning: Failed to load cfgrib - most likely there is a problem accessing the ecCodes library. ... --------------------------------------------------------------------------- RuntimeError Traceback (most recent call last) /tmp/ipykernel_86812/857012844.py in <module> ----> 1 import cfgrib ~/.local/lib/python3.10/site-packages/cfgrib/__init__.py in <module> 18 # cfgrib core API depends on the ECMWF ecCodes C-library only 19 from .abc import Field, Fieldset, Index, MappingFieldset ---> 20 from .cfmessage import COMPUTED_KEYS 21 from .dataset import ( 22 Dataset, ... ~/.local/lib/python3.10/site-packages/gribapi/bindings.py in <module> 33 library_path = findlibs.find("eccodes") 34 if library_path is None: ---> 35 raise RuntimeError("Cannot find the ecCodes library") 36 37 # default encoding for ecCodes strings RuntimeError: Cannot find the ecCodes library --
comment:4 by , 19 months ago
.. after using pip3
:
$ pip3 install --user ecCodes Req: ecCodes in /home/user/.local/lib/python3.10/site-packages (1.5.2) Req: findlibs in /home/user/.local/lib/python3.10/site-packages (from ecCodes) (0.0.5) Req: numpy in /usr/lib/python3/dist-packages (from ecCodes) (1.21.5) Req: attrs in /usr/lib/python3/dist-packages (from ecCodes) (21.2.0) Req: cffi in /home/user/.local/lib/python3.10/site-packages (from ecCodes) (1.15.1) Req: pycparser in /home/user/.local/lib/python3.10/site-packages (from cffi->ecCodes) (2.21)
comment:5 by , 19 months ago
ol16 b73
user@osgeolive:~/odc$ pip3 install --user --upgrade-strategy=only-if-needed xarray[io] Requirement already satisfied: xarray[io] in /usr/lib/python3/dist-packages (0.16.1) Collecting cfgrib .... Installing collected packages: findlibs, docopt, asciitree, Webob, pycparser, platformdirs, numcodecs, h5py, fasteners, zarr, pydap, pooch, h5netcdf, cffi, eccodes, cfgrib WARNING: The scripts dods and pydap are installed in '/home/user/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. WARNING: The script cfgrib is installed in '/home/user/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. Successfully installed Webob-1.8.7 asciitree-0.3.3 cffi-1.15.1 cfgrib-0.9.10.4 docopt-0.6.2 eccodes-1.5.2 fasteners-0.18 findlibs-0.0.5 h5netcdf-1.1.0 h5py-3.8.0 numcodecs-0.11.0 platformdirs-3.5.1 pooch-1.7.0 pycparser-2.21 pydap-3.4.1 zarr-2.14.2
comment:6 by , 18 months ago
ol16 beta1
user@osgeolive:~$ python3 -m pip install --upgrade-strategy=only-if-needed --user "xarray[io]" Requirement already satisfied: xarray[io] in /usr/lib/python3/dist-packages (0.16.1) Collecting cfgrib Downloading cfgrib-0.9.10.4-py3-none-any.whl (47 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 47.1/47.1 KB 270.7 kB/s eta 0:00:00 Requirement already satisfied: cftime in /usr/lib/python3/dist-packages (from xarray[io]) (1.5.2) Requirement already satisfied: fsspec in /usr/lib/python3/dist-packages (from xarray[io]) (2022.1.0) Collecting h5netcdf Downloading h5netcdf-1.2.0-py3-none-any.whl (43 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 43.3/43.3 KB 319.2 kB/s eta 0:00:00 Requirement already satisfied: netCDF4 in /usr/lib/python3/dist-packages (from xarray[io]) (1.5.8) Collecting pooch Downloading pooch-1.7.0-py3-none-any.whl (60 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 60.9/60.9 KB 285.2 kB/s eta 0:00:00 Collecting pydap Downloading pydap-3.4.1-py3-none-any.whl (2.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.3/2.3 MB 269.0 kB/s eta 0:00:00 Requirement already satisfied: rasterio in /usr/lib/python3/dist-packages (from xarray[io]) (1.3.4) Requirement already satisfied: scipy in /usr/lib/python3/dist-packages (from xarray[io]) (1.8.0) Collecting zarr Downloading zarr-2.15.0-py3-none-any.whl (206 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 206.1/206.1 KB 265.8 kB/s eta 0:00:00 Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (1.21.5) Collecting eccodes>=0.9.8 Downloading eccodes-1.5.2.tar.gz (2.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.3/2.3 MB 269.4 kB/s eta 0:00:00 Preparing metadata (setup.py) ... done Requirement already satisfied: click in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (8.0.3) Requirement already satisfied: attrs>=19.2 in /usr/lib/python3/dist-packages (from cfgrib->xarray[io]) (21.2.0) Requirement already satisfied: packaging in /usr/lib/python3/dist-packages (from h5netcdf->xarray[io]) (21.3) Collecting h5py Downloading h5py-3.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.6 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.6/4.6 MB 268.9 kB/s eta 0:00:00 Requirement already satisfied: requests>=2.19.0 in /usr/lib/python3/dist-packages (from pooch->xarray[io]) (2.25.1) Collecting platformdirs>=2.5.0 Downloading platformdirs-3.5.3-py3-none-any.whl (15 kB) Requirement already satisfied: six>=1.4.0 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (1.16.0) Requirement already satisfied: beautifulsoup4 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (4.10.0) Requirement already satisfied: Jinja2 in /usr/lib/python3/dist-packages (from pydap->xarray[io]) (3.0.3) Collecting docopt Downloading docopt-0.6.2.tar.gz (25 kB) Preparing metadata (setup.py) ... done Collecting Webob Downloading WebOb-1.8.7-py2.py3-none-any.whl (114 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 115.0/115.0 KB 244.7 kB/s eta 0:00:00 Requirement already satisfied: certifi in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (2020.6.20) Requirement already satisfied: affine in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (2.3.0) Requirement already satisfied: snuggs>=1.4.1 in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (1.4.7) Requirement already satisfied: setuptools in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (59.6.0) Requirement already satisfied: cligj>=0.5 in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (0.7.2) Requirement already satisfied: click-plugins in /usr/lib/python3/dist-packages (from rasterio->xarray[io]) (1.1.1) Collecting fasteners Downloading fasteners-0.18-py3-none-any.whl (18 kB) Collecting numcodecs>=0.10.0 Downloading numcodecs-0.11.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (6.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.7/6.7 MB 267.0 kB/s eta 0:00:00 Collecting asciitree Downloading asciitree-0.3.3.tar.gz (4.0 kB) Preparing metadata (setup.py) ... done Collecting cffi Downloading cffi-1.15.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (441 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 441.8/441.8 KB 272.7 kB/s eta 0:00:00 Collecting findlibs Downloading findlibs-0.0.5.tar.gz (6.6 kB) Preparing metadata (setup.py) ... done Requirement already satisfied: entrypoints in /usr/lib/python3/dist-packages (from numcodecs>=0.10.0->zarr->xarray[io]) (0.4) Collecting pycparser Downloading pycparser-2.21-py2.py3-none-any.whl (118 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 118.7/118.7 KB 262.5 kB/s eta 0:00:00 Building wheels for collected packages: eccodes, asciitree, docopt, findlibs Building wheel for eccodes (setup.py) ... done Created wheel for eccodes: filename=eccodes-1.5.2-py3-none-any.whl size=40560 sha256=01468a9adef4291140484cdac7bcfc0335dc329fd9ce2fd42991faa5bc87fc05 Stored in directory: /home/user/.cache/pip/wheels/30/a8/9b/b80ae7683c2187d95eab008b4c57a5a57c50836aef413262a5 Building wheel for asciitree (setup.py) ... done Created wheel for asciitree: filename=asciitree-0.3.3-py3-none-any.whl size=5050 sha256=afd530a7cbc2223f02da2928fb9c3f57c83cd280ab87938eb7e7a5c8c0ea1a4d Stored in directory: /home/user/.cache/pip/wheels/7f/4e/be/1171b40f43b918087657ec57cf3b81fa1a2e027d8755baa184 Building wheel for docopt (setup.py) ... done Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13723 sha256=2b12e02f016c854d20ae9c67b247542066cc31169945cdaa4e9f86bc4d2c1359 Stored in directory: /home/user/.cache/pip/wheels/fc/ab/d4/5da2067ac95b36618c629a5f93f809425700506f72c9732fac Building wheel for findlibs (setup.py) ... done Created wheel for findlibs: filename=findlibs-0.0.5-py3-none-any.whl size=6954 sha256=e6a0a12f8c18f6153a247b25b53d442c77c2b504c5704b8807ca93adb6a697c1 Stored in directory: /home/user/.cache/pip/wheels/2e/67/14/22fa5b9fd9c41be520b37e908597d6a262803c0fcf2ba7c2c3 Successfully built eccodes asciitree docopt findlibs Installing collected packages: findlibs, docopt, asciitree, Webob, pycparser, platformdirs, numcodecs, h5py, fasteners, zarr, pydap, pooch, h5netcdf, cffi, eccodes, cfgrib WARNING: The scripts dods and pydap are installed in '/home/user/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. WARNING: The script cfgrib is installed in '/home/user/.local/bin' which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. Successfully installed Webob-1.8.7 asciitree-0.3.3 cffi-1.15.1 cfgrib-0.9.10.4 docopt-0.6.2 eccodes-1.5.2 fasteners-0.18 findlibs-0.0.5 h5netcdf-1.2.0 h5py-3.8.0 numcodecs-0.11.0 platformdirs-3.5.3 pooch-1.7.0 pycparser-2.21 pydap-3.4.1 zarr-2.15.0
comment:7 by , 7 months ago
Milestone: | OSGeoLive16.0 → OSGeoLive17.0 |
---|
Ticket retargeted after milestone closed
comment:8 by , 6 weeks ago
ol17_build95
show the requirements for extended xarray[io] by test install
user@osgeolive:~/Downloads$ python3 -m pip install --upgrade-strategy=only-if-needed --break-system-packages --user \ "xarray[io]" Requirement already satisfied: xarray[io] in /usr/lib/python3/dist-packages (2024.2.0) Requirement already satisfied: cftime in /usr/lib/python3/dist-packages (from xarray[io]) (1.6.3) Requirement already satisfied: fsspec in /usr/lib/python3/dist-packages (from xarray[io]) (2024.2.0) Collecting h5netcdf (from xarray[io]) Downloading h5netcdf-1.4.0-py3-none-any.whl.metadata (13 kB) Requirement already satisfied: netCDF4 in /usr/lib/python3/dist-packages (from xarray[io]) (1.6.5) Collecting pooch (from xarray[io]) Downloading pooch-1.8.2-py3-none-any.whl.metadata (10 kB) Requirement already satisfied: scipy in /usr/lib/python3/dist-packages (from xarray[io]) (1.11.4) Collecting zarr (from xarray[io]) Downloading zarr-2.18.3-py3-none-any.whl.metadata (5.7 kB) Requirement already satisfied: numpy>=1.26.0b1 in /usr/lib/python3/dist-packages (from cftime->xarray[io]) (1.26.4) Collecting h5py (from h5netcdf->xarray[io]) Downloading h5py-3.12.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.5 kB) Requirement already satisfied: packaging in /usr/lib/python3/dist-packages (from h5netcdf->xarray[io]) (24.0) Requirement already satisfied: certifi in /usr/lib/python3/dist-packages (from netCDF4->xarray[io]) (2023.11.17) Requirement already satisfied: platformdirs>=2.5.0 in /usr/lib/python3/dist-packages (from pooch->xarray[io]) (4.2.0) Requirement already satisfied: requests>=2.19.0 in /usr/lib/python3/dist-packages (from pooch->xarray[io]) (2.31.0) Collecting asciitree (from zarr->xarray[io]) Downloading asciitree-0.3.3.tar.gz (4.0 kB) Preparing metadata (setup.py) ... done Collecting numcodecs>=0.10.0 (from zarr->xarray[io]) Downloading numcodecs-0.13.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB) Collecting fasteners (from zarr->xarray[io]) Downloading fasteners-0.19-py3-none-any.whl.metadata (4.9 kB) Downloading h5netcdf-1.4.0-py3-none-any.whl (50 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 50.0/50.0 kB 282.5 kB/s eta 0:00:00 Downloading pooch-1.8.2-py3-none-any.whl (64 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 64.6/64.6 kB 284.0 kB/s eta 0:00:00 Downloading zarr-2.18.3-py3-none-any.whl (210 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 210.7/210.7 kB 288.0 kB/s eta 0:00:00 Downloading numcodecs-0.13.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 8.9/8.9 MB 260.4 kB/s eta 0:00:00 Downloading fasteners-0.19-py3-none-any.whl (18 kB) Downloading h5py-3.12.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (5.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.4/5.4 MB 242.1 kB/s eta 0:00:00 Building wheels for collected packages: asciitree Building wheel for asciitree (setup.py) ... done Created wheel for asciitree: filename=asciitree-0.3.3-py3-none-any.whl size=5033 sha256=3ec4432f51ed832a40ee9d5e3f0b3a60aae6b733d0acb0242688dd56299cefb4 Stored in directory: /home/user/.cache/pip/wheels/a5/d7/98/f56ae733748cd0fa577172bda0e73e0b1f1793c98e09b9e458 Successfully built asciitree Installing collected packages: asciitree, pooch, numcodecs, h5py, fasteners, zarr, h5netcdf Successfully installed asciitree-0.3.3 fasteners-0.19 h5netcdf-1.4.0 h5py-3.12.1 numcodecs-0.13.1 pooch-1.8.2 zarr-2.18.3
comment:9 by , 6 weeks ago
TODO: install rioxarray
adds rioxarray.open_rasterio("my.tif")
replaces deprecated xr.read_dataset('a,tif', engine="rasterio")
comment:11 by , 5 weeks ago
Resolution: | → fixed |
---|---|
Status: | new → closed |
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debian / ubuntu apply these patches ?