Opened 15 years ago
Closed 15 years ago
#402 closed defect (worksforme)
v.in.ogr buffer overflow
| Reported by: | epatton | Owned by: | |
|---|---|---|---|
| Priority: | major | Milestone: | 6.4.0 |
| Component: | Vector | Version: | svn-develbranch6 |
| Keywords: | buffer overflow, vector, shapefile, import | Cc: | |
| CPU: | x86-64 | Platform: | Linux |
Description
I'm trying to import a shapefile into Grass (one polygon). Here's the ogrinfo:
ogrinfo -al -so ntl_polygon_utm.shp
INFO: Open of `ntl_polygon_utm.shp'
using driver `ESRI Shapefile' successful.
Layer name: ntl_polygon_utm
Geometry: Polygon
Feature Count: 1
Extent: (169847.156250, 4875588.500000) - (229881.546875, 4907886.500000)
Layer SRS WKT:
PROJCS["WGS_1984_UTM_Zone_20N",
GEOGCS["GCS_WGS_1984",
DATUM["WGS_1984",
SPHEROID["WGS_1984",6378137.0,298.257223563]],
PRIMEM["Greenwich",0.0],
UNIT["Degree",0.0174532925199433]],
PROJECTION["Transverse_Mercator"],
PARAMETER["False_Easting",500000.0],
PARAMETER["False_Northing",0.0],
PARAMETER["Central_Meridian",-63.0],
PARAMETER["Scale_Factor",0.9996],
PARAMETER["Latitude_Of_Origin",0.0],
UNIT["Meter",1.0]]
AREA: Real (13.11)
PERIMETER: Real (13.11)
NTL_: Integer (9.0)
NTL_ID: Integer (9.0)
NTL_SYM: Integer (4.0)
v.in.ogr chokes on it, however:
v.in.ogr dsn=. layer=ntl_polygon_utm output=A_Series_Mapsheet_1_Carto --o --v Projection of input dataset and current location appear to match Layer: ntl_polygon_utm Importing map 1 features... *** buffer overflow detected ***: v.in.ogr terminated ======= Backtrace: ========= /lib/libc.so.6(__fortify_fail+0x37)[0x7f1098f3f887] /lib/libc.so.6[0x7f1098f3d750] /lib/libc.so.6[0x7f1098f3cd8b] /lib/libc.so.6(__snprintf_chk+0x7b)[0x7f1098f3cc5b] /usr/local/lib/libgdal.so.1(_ZN10OGRFeature16GetFieldAsStringEi+0x346)[0x7f1099c99ab6] v.in.ogr(main+0x10f9)[0x4055d9] /lib/libc.so.6(__libc_start_main+0xe6)[0x7f1098e5e466] v.in.ogr[0x403949] ======= Memory map: ======== 00400000-00409000 r-xp 00000000 08:03 981639 /usr/local/grass-6.4.svn/bin/v.in.ogr 00608000-00609000 r--p 00008000 08:03 981639 /usr/local/grass-6.4.svn/bin/v.in.ogr 00609000-0060a000 rw-p 00009000 08:03 981639 /usr/local/grass-6.4.svn/bin/v.in.ogr 01017000-01059000 rw-p 01017000 00:00 0 [heap] 7f1092b6f000-7f1092b7a000 r-xp 00000000 08:03 449765 /lib/libnss_files-2.8.90.so 7f1092b7a000-7f1092d79000 ---p 0000b000 08:03 449765 /lib/libnss_files-2.8.90.so 7f1092d79000-7f1092d7a000 r--p 0000a000 08:03 449765 /lib/libnss_files-2.8.90.so 7f1092d7a000-7f1092d7b000 rw-p 0000b000 08:03 449765 /lib/libnss_files-2.8.90.so 7f1092d7b000-7f1092d85000 r-xp 00000000 08:03 449775 /lib/libnss_nis-2.8.90.so 7f1092d85000-7f1092f84000 ---p 0000a000 08:03 449775 /lib/libnss_nis-2.8.90.so 7f1092f84000-7f1092f85000 r--p 00009000 08:03 449775 /lib/libnss_nis-2.8.90.so 7f1092f85000-7f1092f86000 rw-p 0000a000 08:03 449775 /lib/libnss_nis-2.8.90.so 7f1092f86000-7f1092f9c000 r-xp 00000000 08:03 449759 /lib/libnsl-2.8.90.so 7f1092f9c000-7f109319b000 ---p 00016000 08:03 449759 /lib/libnsl-2.8.90.so 7f109319b000-7f109319c000 r--p 00015000 08:03 449759 /lib/libnsl-2.8.90.so 7f109319c000-7f109319d000 rw-p 00016000 08:03 449759 /lib/libnsl-2.8.90.so 7f109319d000-7f109319f000 rw-p 7f109319d000 00:00 0 7f109319f000-7f10931a7000 r-xp 00000000 08:03 449761 /lib/libnss_compat-2.8.90.so 7f10931a7000-7f10933a6000 ---p 00008000 08:03 449761 /lib/libnss_compat-2.8.90.so 7f10933a6000-7f10933a7000 r--p 00007000 08:03 449761 /lib/libnss_compat-2.8.90.so 7f10933a7000-7f10933a8000 rw-p 00008000 08:03 449761 /lib/libnss_compat-2.8.90.so 7f10933a8000-7f109345e000 r-xp 00000000 08:03 934123 /usr/lib/libfftw3.so.3.1.2 7f109345e000-7f109365d000 ---p 000b6000 08:03 934123 /usr/lib/libfftw3.so.3.1.2 7f109365d000-7f1093663000 r--p 000b5000 08:03 934123 /usr/lib/libfftw3.so.3.1.2 7f1093663000-7f1093664000 rw-p 000bb000 08:03 934123 /usr/lib/libfftw3.so.3.1.2 7f1093664000-7f109369b000 r-xp 00000000 08:03 449756 /lib/libncurses.so.5.6 7f109369b000-7f109389a000 ---p 00037000 08:03 449756 /lib/libncurses.so.5.6 7f109389a000-7f109389f000 rw-p 00036000 08:03 449756 /lib/libncurses.so.5.6 7f109389f000-7f10938a5000 r-xp 00000000 08:03 426462 /usr/local/grass-6.4.svn/lib/libgrass_gmath.6.4.svn.so 7f10938a5000-7f1093aa4000 ---p 00006000 08:03 426462 /usr/local/grass-6.4.svn/lib/libgrass_gmath.6.4.svn.so 7f1093aa4000-7f1093aa5000 r--p 00005000 08:03 426462 /usr/local/grass-6.4.svn/lib/libgrass_gmath.6.4.svn.so 7f1093aa5000-7f1093aa6000 rw-p 00006000 08:03 426462 /usr/local/grass-6.4.svn/lib/libgrass_gmath.6.4.svn.so 7f1093aa6000-7f1093aaa000 r-xp 00000000 08:03 426504 /usr/local/grass-6.4.svn/lib/libgrass_vask.6.4.svn.so 7f1093aaa000-7f1093ca9000 ---p 00004000 08:03 426504 /usr/local/grass-6.4.svn/lib/libgrass_vask.6.4.svn.so 7f1093ca9000-7f1093caa000 r--p 00003000 08:03 426504 /usr/local/grass-6.4.svn/lib/libgrass_vask.6.4.svn.soAborted
Running gdb explicity on this import produces the same backtrace info, with this extra bit at the very end:
Program received signal SIGABRT, Aborted. [Switching to Thread 0x7f006cf91710 (LWP 13683)] 0x00007f006a68afd5 in raise () from /lib/libc.so.6
Any ideas?
~ E.
Attachments (1)
Change History (10)
comment:1 by , 15 years ago
by , 15 years ago
| Attachment: | Test_polygon.tar.bz2 added |
|---|
follow-up: 3 comment:2 by , 15 years ago
Hi Martin, I've uploaded the polygon shapefile which is causing the errors.
~ Eric.
comment:3 by , 15 years ago
Replying to epatton:
Hi Martin, I've uploaded the polygon shapefile which is causing the errors.
Hm, it seems to be platform-specific. I have imported the shapefile without problems (GNU/Linux, 32bit, gcc 4.1.3).
Martin
follow-up: 5 comment:4 by , 15 years ago
It seems the problem is larger than just importing this shapefile. I tried exporting a different Grass vector from a different location to shapefile using v.out.ogr, then importing that shapefile back into its parent location. I get the same result, a buffer overflow.
Can anyone with a 64-bit system test importing shapefiles with v.in.ogr?
~ Eric.
comment:5 by , 15 years ago
Replying to epatton:
Can anyone with a 64-bit system test importing shapefiles with v.in.ogr?
No problems on GNU/Linux 64 bit, gcc 4.1.2, gdal 1.5.2, grass64 and grass70. Maybe this is specific to your particular platform? Compile and install gdal anew?
Markus M
comment:6 by , 15 years ago
From grass-dev ML:
same problem here:
Ubuntu 8.10:
ii gdal-bin 1.5.2-4.1~intrepid ii libgdal1-1.5.0 1.5.2-4.1~intrepid ii libgdal1-1.5.0-grass 1.5.2-1 ii libgdal1-dev 1.5.2-4.1~intrepid
applyes for GRASS 6.3 (les-ejk ubuntu package) and 6.4 (fresh source compilation)
the problem seems to be in ubuntu gdal package
$ ogrinfo /home/jachym/usr/src/thuban/thuban_trunk/Data/iceland/roads-line.shp
INFO: Open of `/home/jachym/usr/src/thuban/thuban_trunk/Data/iceland/roads-line.shp'
using driver `ESRI Shapefile' successful.
1: roads-line (Line String)
$ ogrinfo /home/jachym/usr/src/thuban/thuban_trunk/Data/iceland/roads-line.shp
roads-line
INFO: Open of `/home/jachym/usr/src/thuban/thuban_trunk/Data/iceland/roads-line.shp'
using driver `ESRI Shapefile' successful.
Layer name: roads-line
Geometry: Line String
Feature Count: 839
Extent: (-24.450359, 63.426830) - (-13.556688, 66.520111)
Layer SRS WKT:
(unknown)
FNODE_: Real (11.0)
TNODE_: Real (11.0)
LPOLY_: Real (11.0)
RPOLY_: Real (11.0)
LENGTH: Real (12.3)
RDLINE_: Real (11.0)
RDLINE_ID: Real (11.0)
RDLNTYPE: Integer (2.0)
RDLNSTAT: Integer (2.0)
OGRFeature(roads-line):0
*** buffer overflow detected ***: ogrinfo terminated
======= Backtrace: =========
/lib/tls/i686/cmov/libc.so.6(__fortify_fail+0x48)[0xb6979558]
/lib/tls/i686/cmov/libc.so.6[0xb6977680]
/lib/tls/i686/cmov/libc.so.6[0xb6976f87]
/lib/tls/i686/cmov/libc.so.6(__snprintf_chk+0x34)[0xb6976e74]
/usr/lib/libgdal1.5.0.so.1(_ZN10OGRFeature16GetFieldAsStringEi+0x36f)[0xb7d5641f]
/usr/lib/libgdal1.5.0.so.1(_ZN10OGRFeature12DumpReadableEP8_IO_FILE+0x92)[0xb7d57012]
ogrinfo[0x8049380]
ogrinfo[0x8049cd2]
/lib/tls/i686/cmov/libc.so.6(__libc_start_main+0xe5)[0xb6895685]
ogrinfo[0x80491e1]
======= Memory map: ========
08048000-0804b000 r-xp 00000000 08:01 241275 /usr/bin/ogrinfo
0804b000-0804c000 r--p 00002000 08:01 241275 /usr/bin/ogrinfo
0804c000-0804d000 rw-p 00003000 08:01 241275 /usr/bin/ogrinfo
097df000-09800000 rw-p 097df000 00:00 0 [heap]
[.....]
so, we have to dig in this direction
jachym
comment:7 by , 15 years ago
Jachym,
I'm using gdal-1.5.3, compiled from source; so Ubuntu packages can't be the problem in my case. I'm recompiling Grass and gdal and will report the results soon.
~ Eric.
comment:8 by , 15 years ago
I noticed the "OGRFeature16GetFieldAsString" error that we both had, and thought there might be a problem with the dbf file that was causing this error, so I tried opening it in Open Office, but that program chokes with an error "Unable to open file for reading". I then renamed the dbf to something else, and tried importing the shapefile via v.in.ogr and it worked! I can view the vector fine; v.info doesn't show anything out of the ordinary.
This is still disconcerting, as the attributes have not survived the import. It's not a big problem for the polygons I'm using in this case, as their only purpose is to be rasterized into masks later on, but still...and I can't understand why ooffice won't open the dbf; gnumeric doesn't have any problem opening it.
~ Eric.
comment:9 by , 15 years ago
| Resolution: | → worksforme |
|---|---|
| Status: | new → closed |
I've removed the gdal 1.5.2 version that shipped with Ubuntu 8.10 and compiled gdal 1.6.0 in its place. v.in.ogr is working fine now, so I'm closing this bug.
~ Eric.
Can you send me sample data? Martin