wiki:rfc15_nodatabitmask

RFC 15: Band Masks

Author: Frank Warmerdam
Contact: warmerdam@…
Status: Adopted

Summary

Some file formats support a concept of a bitmask to identify pixels that are not valid data. This can be particularly valuable with byte image formats where a nodata pixel value can not be used because all pixel values have a valid meaning. This RFC tries to formalize a way of recognising and accessing such null masks through the GDAL API, while moving to a uniform means of representing other kinds of masking (nodata values, and alpha bands).

The basic approach is to treat such masks as raster bands, but not regular raster bands on the datasource. Instead they are freestanding raster bands in a manner similar to the overview raster band objects. The masks are represented as GDT_Byte bands with a value of zero indicating nodata and non-zero values indicating valid data. Normally the value 255 will be used for valid data pixels.

API

GDALRasterBand is extended with the following methods:

    virtual GDALRasterBand *GetMaskBand();
    virtual int             GetMaskFlags();
    virtual CPLErr          CreateMaskBand( int nFlags );

GDALDataset is extended with the following method:

    virtual CPLErr          CreateMaskBand( nFlags );

Note that the GetMaskBand() should always return a GDALRasterBand mask, even if it is only an all 255 mask with the flags indicating GMF_ALL_VALID.

The GetMaskFlags() method returns an bitwise OR-ed set of status flags with the following available definitions that may be extended in the future:

  • GMF_ALL_VALID(0x01): There are no invalid pixels, all mask values will be 255. When used this will normally be the only flag set.
  • GMF_PER_DATASET(0x02): The mask band is shared between all bands on the dataset.
  • GMF_ALPHA(0x04): The mask band is actually an alpha band and may have values other than 0 and 255.
  • GMF_NODATA(0x08): Indicates the mask is actually being generated from nodata values. (mutually exclusive of GMF_ALPHA)

The CreateMaskBand() method will attempt to create a mask band associated with the band on which it is invoked, issuing an error if it is not supported. Currently the only flag that is meaningful to pass in when creating a mask band is GMF_PER_DATASET. The rest are used to represent special system provided mask bands. GMF_PER_DATASET is assumed when CreateMaskBand?() is called on a dataset.

Default GetMaskBand() / GetMaskFlags() Implementation

The GDALRasterBand class will include a default implementation of GetMaskBand() that returns one of three default implementations.

  • If a corresponding .msk file exists it will be used for the mask band.
  • If the band has a nodata value set, an instance of the new GDALNodataMaskRasterBand class will be returned. GetMaskFlags() will return GMF_NODATA.
  • If there is no nodata value, but the dataset has an alpha band that seems to apply to this band (specific rules yet to be determined) and that is of type GDT_Byte then that alpha band will be returned, and the flags GMF_PER_DATASET and GMF_ALPHA will be returned in the flags.
  • If neither of the above apply, an instance of the new GDALAllValidRasterBand class will be returned that has 255 values for all pixels. The null flags will return GMF_ALL_VALID.

The GDALRasterBand will include a protected poMask instance variable and a bOwnMask flag. The first call to the default GetMaskBand() will result in creation of the GDALNodataMaskRasterBand, GDALAllValidMaskRasterBand and their assignment to poMask with bOwnMask set TRUE. If an alpha band is identified for use, it will be assigned to poMask and bOwnMask set to FALSE. The GDALRasterBand class will take care of deleting the poMask if set and bOwnMask is true in the destructor. Derived band classes may safely use the poMask and bOwnMask flag similarly as long as the semantics are maintained.

Default CreateMaskBand()

The default implementation of the CreateMaskBand() method will be implemented based on similar rules to the .ovr handling implemented using the GDALDefaultOverviews object. A TIFF file with the extension .msk will be created with the same basename as the original file, and it will have as many bands as the original image (or just one for GMF_PER_DATASET). The mask images will be deflate compressed tiled images with the same block size as the original image if possible.

The default implementation of GetFileList() will also be modified to know about the .msk files.

CreateCopy()

The GDALDriver::DefaultCreateCopy?(), and GDALPamDataset::CloneInfo?() methods will be updated to copy mask information if it seems necessary and is possible. Note that NODATA, ALL_VALID and ALPHA type masks are not copied since they are just derived information.

Alpha Bands

When a dataset has a normal GDT_Byte alpha (transparency) band that applies, it should be returned as the null mask, but the GetMaskFlags() method should include GMF_ALPHA. For processing purposes any value other than 0 should be treated as valid data, though some algorithms will treat values between 1 and 254 as partially transparent.

Drivers Updated

These drivers will be updated:

  • JPEG Driver: support the "zlib compressed mask appended to the file" approach used by a few data providers.
  • GRASS Driver: updated to support handling null values as masks.

Possibly updated:

  • HDF4 Driver: This driver might possibly be updated to return real mask if we can figure out a way.
  • SDE Driver: This driver might be updated if Howard has sufficient time and enthusiasm.

Utilities

The gdalwarp utility and the gdal warper algorithm will be updated to use null masks on input. The warper algorithm already uses essentially this model internally. For now gdalwarp output (nodata or alpha band) will remain unchanged, though at some point in the future support may be added for explicitly generating null masks, but for most purposes producing an alpha band is producing a null mask.

Implementation Plan

This change will be implemented by Frank Warmerdam in trunk in time for the 1.5.0 release.

SWIG Implications

The GetMaskBand(), GetMaskFlags() and CreateMaskBand() methods (and corresponding defines) will need to be added. The mask should work like a normal raster band for swig purposes so minimal special work should be required.

Testing

The gdalautotest will be extended with the following:

  • gcore/mask.py: test default mask implementation for nodata, alpha and all valid cases.
  • gdriver/jpeg.py: extend with a test for "appended bitmask" case - creation and reading.

Interactive testing will be done for gdalwarp.

Last modified 9 years ago Last modified on Aug 28, 2007 10:53:30 AM